3D structure

PDB id
6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome initiation complex (IC) with experimentally assigned potassium ions
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6QNQ_090 not in the Motif Atlas
Homologous match to HL_7RQB_058
Geometric discrepancy: 0.1557
The information below is about HL_7RQB_058
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

6QNQ|1|14|C|2374
6QNQ|1|14|G|2375
6QNQ|1|14|A|2376
6QNQ|1|14|A|2377
6QNQ|1|14|A|2378
6QNQ|1|14|G|2379

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 65
50S ribosomal protein L18

Coloring options:


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