HL_6QNQ_208
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNQ_208 not in the Motif Atlas
- Homologous match to HL_5IBB_210
- Geometric discrepancy: 0.1603
- The information below is about HL_5IBB_210
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6QNQ|1|1K|G|32
6QNQ|1|1K|C|33
6QNQ|1|1K|U|34
6QNQ|1|1K|C|35
6QNQ|1|1K|A|36
6QNQ|1|1K|U|37
6QNQ|1|1K|A|38
6QNQ|1|1K|A|39
6QNQ|1|1K|C|40
Current chains
- Chain 1K
- E. coli tRNAfMet
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3I
- 30S ribosomal protein S12
- Chain 4I
- 30S ribosomal protein S13
- Chain 4K
- mRNA
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