HL_6QNQ_219
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 6QNQ|1|3L|G|19, 6QNQ|1|3L|G|20, 6QNQ|1|3L|U|21, 6QNQ|1|3L|A|22
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNQ_219 not in the Motif Atlas
- Homologous match to HL_5EL4_221
- Geometric discrepancy: 0.374
- The information below is about HL_5EL4_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QNQ|1|3L|C|13
6QNQ|1|3L|A|14
6QNQ|1|3L|G|15
6QNQ|1|3L|C|16
6QNQ|1|3L|C|17
6QNQ|1|3L|U|18
6QNQ|1|3L|G|19
6QNQ|1|3L|G|20
6QNQ|1|3L|U|21
6QNQ|1|3L|A|22
6QNQ|1|3L|G|23
Current chains
- Chain 3L
- E. coli tRNAfMet
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: