HL_6QNQ_227

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CCGCGAAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUGCGUAAUAGCUCACUGGUCGAGUGG

Length

76 nucleotides

Bulged bases

6QNQ|1|14|A|1046, 6QNQ|1|14|U|1061, 6QNQ|1|14|U|1083, 6QNQ|1|14|A|1085, 6QNQ|1|14|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNQ|1|14|C|1040
6QNQ|1|14|C|1041
6QNQ|1|14|G|1042
6QNQ|1|14|C|1043
6QNQ|1|14|G|1044
6QNQ|1|14|A|1045
6QNQ|1|14|A|1046
6QNQ|1|14|G|1047
6QNQ|1|14|A|1048
6QNQ|1|14|C|1049
6QNQ|1|14|A|1050
6QNQ|1|14|G|1051
6QNQ|1|14|C|1052
6QNQ|1|14|C|1053
6QNQ|1|14|A|1054
6QNQ|1|14|G|1055
6QNQ|1|14|G|1056
6QNQ|1|14|A|1057
6QNQ|1|14|U|1058
6QNQ|1|14|G|1059
6QNQ|1|14|U|1060
6QNQ|1|14|U|1061
6QNQ|1|14|G|1062
6QNQ|1|14|G|1063
6QNQ|1|14|C|1064
6QNQ|1|14|U|1065
6QNQ|1|14|U|1066
6QNQ|1|14|A|1067
6QNQ|1|14|G|1068
6QNQ|1|14|A|1069
6QNQ|1|14|A|1070
6QNQ|1|14|G|1071
6QNQ|1|14|C|1072
6QNQ|1|14|A|1073
6QNQ|1|14|G|1074
6QNQ|1|14|C|1075
6QNQ|1|14|C|1076
6QNQ|1|14|A|1077
6QNQ|1|14|U|1078
6QNQ|1|14|C|1079
6QNQ|1|14|A|1080
6QNQ|1|14|U|1081
6QNQ|1|14|U|1082
6QNQ|1|14|U|1083
6QNQ|1|14|A|1084
6QNQ|1|14|A|1085
6QNQ|1|14|A|1086
6QNQ|1|14|G|1087
6QNQ|1|14|A|1088
6QNQ|1|14|G|1089
6QNQ|1|14|U|1090
6QNQ|1|14|G|1091
6QNQ|1|14|C|1092
6QNQ|1|14|G|1093
6QNQ|1|14|U|1094
6QNQ|1|14|A|1095
6QNQ|1|14|A|1096
6QNQ|1|14|U|1097
6QNQ|1|14|A|1098
6QNQ|1|14|G|1099
6QNQ|1|14|C|1100
6QNQ|1|14|U|1101
6QNQ|1|14|C|1102
6QNQ|1|14|A|1103
6QNQ|1|14|C|1104
6QNQ|1|14|U|1105
6QNQ|1|14|G|1106
6QNQ|1|14|G|1107
6QNQ|1|14|U|1108
6QNQ|1|14|C|1109
6QNQ|1|14|G|1110
6QNQ|1|14|A|1111
6QNQ|1|14|G|1112
6QNQ|1|14|U|1113
6QNQ|1|14|G|1114
6QNQ|1|14|G|1115

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6

Chain D5

50S ribosomal protein L25