Loop HL_6QNQ

3D structure

PDB id: 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å

Loop

Sequence: AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUGCGUAAUAGCUCACU
Length: 52 nucleotides
Bulged bases: 6QNQ|1|1H|U|1061, 6QNQ|1|1H|U|1066, 6QNQ|1|1H|A|1070, 6QNQ|1|1H|A|1096
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6QNQ|1|1H|A|1054
6QNQ|1|1H|G|1055
6QNQ|1|1H|G|1056
6QNQ|1|1H|A|1057
6QNQ|1|1H|U|1058
6QNQ|1|1H|G|1059
6QNQ|1|1H|U|1060
6QNQ|1|1H|U|1061
6QNQ|1|1H|G|1062
6QNQ|1|1H|G|1063
6QNQ|1|1H|C|1064
6QNQ|1|1H|U|1065
6QNQ|1|1H|U|1066
6QNQ|1|1H|A|1067
6QNQ|1|1H|G|1068
6QNQ|1|1H|A|1069
6QNQ|1|1H|A|1070
6QNQ|1|1H|G|1071
6QNQ|1|1H|C|1072
6QNQ|1|1H|A|1073
6QNQ|1|1H|G|1074
6QNQ|1|1H|C|1075
6QNQ|1|1H|C|1076
6QNQ|1|1H|A|1077
6QNQ|1|1H|U|1078
6QNQ|1|1H|C|1079
6QNQ|1|1H|A|1080
6QNQ|1|1H|U|1081
6QNQ|1|1H|U|1082
6QNQ|1|1H|U|1083
6QNQ|1|1H|A|1084
6QNQ|1|1H|A|1085
6QNQ|1|1H|A|1086
6QNQ|1|1H|G|1087
6QNQ|1|1H|A|1088
6QNQ|1|1H|G|1089
6QNQ|1|1H|U|1090
6QNQ|1|1H|G|1091
6QNQ|1|1H|C|1092
6QNQ|1|1H|G|1093
6QNQ|1|1H|U|1094
6QNQ|1|1H|A|1095
6QNQ|1|1H|A|1096
6QNQ|1|1H|U|1097
6QNQ|1|1H|A|1098
6QNQ|1|1H|G|1099
6QNQ|1|1H|C|1100
6QNQ|1|1H|U|1101
6QNQ|1|1H|C|1102
6QNQ|1|1H|A|1103
6QNQ|1|1H|C|1104
6QNQ|1|1H|U|1105

Current chains

Chain 1H: 23S ribosomal RNA

Nearby chains

Chain 38: 50S ribosomal protein L10
Chain 51: 50S ribosomal protein L6

HL_6QNQ_241