HL_6QNQ_244

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

6QNQ|1|13|A|465, 6QNQ|1|13|C|466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNQ_244 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.2963

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6QNQ|1|13|C|458
6QNQ|1|13|G|464
6QNQ|1|13|A|465
6QNQ|1|13|C|466
6QNQ|1|13|G|467
6QNQ|1|13|A|468
6QNQ|1|13|G|474

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 7I

30S ribosomal protein S16