3D structure

PDB id
6QUL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUGUUCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6QUL_058 not in the Motif Atlas
Homologous match to HL_4WF9_058
Geometric discrepancy: 0.1358
The information below is about HL_4WF9_058
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_48677.1
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
22

Unit IDs

6QUL|1|A|C|2551
6QUL|1|A|U|2552
6QUL|1|A|G|2553
6QUL|1|A|U|2554
6QUL|1|A|U|2555
6QUL|1|A|C|2556
6QUL|1|A|G|2557

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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