HL_6QZP_037

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAUGGCCUCCGUUG

Length

15 nucleotides

Bulged bases

6QZP|1|L5|C|2488, 6QZP|1|L5|C|2489, 6QZP|1|L5|U|2490

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|C|2482
6QZP|1|L5|G|2483
6QZP|1|L5|A|2484
6QZP|1|L5|U|2485
6QZP|1|L5|G|2486
6QZP|1|L5|G|2487
6QZP|1|L5|C|2488
6QZP|1|L5|C|2489
6QZP|1|L5|U|2490
6QZP|1|L5|C|2491
6QZP|1|L5|C|2492
6QZP|1|L5|G|2493
6QZP|1|L5|U|2494
6QZP|1|L5|U|2495
6QZP|1|L5|G|2496

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S ribosomal protein L23a