HL_6QZP_129
3D structure
- PDB id
- 6QZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UACGCACGGCCGGUACAGUGAAA
- Length
- 23 nucleotides
- Bulged bases
- 6QZP|1|S2|C|65, 6QZP|1|S2|C|67, 6QZP|1|S2|G|75
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QZP|1|S2|U|63
6QZP|1|S2|A|64
6QZP|1|S2|C|65
6QZP|1|S2|G|66
6QZP|1|S2|C|67
6QZP|1|S2|A|68
6QZP|1|S2|C|69
6QZP|1|S2|G|70
6QZP|1|S2|G|71
6QZP|1|S2|C|72
6QZP|1|S2|C|73
6QZP|1|S2|G|74
6QZP|1|S2|G|75
6QZP|1|S2|U|76
6QZP|1|S2|A|77
6QZP|1|S2|C|78
6QZP|1|S2|A|79
6QZP|1|S2|G|80
6QZP|1|S2|U|81
6QZP|1|S2|G|82
6QZP|1|S2|A|83
6QZP|1|S2|A|84
6QZP|1|S2|A|85
Current chains
- Chain S2
- 18S rRNA (1740-MER)
Nearby chains
- Chain LW
- 60S ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: