HL_6QZP_130

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCCCUUCGCGGGGG

Length

14 nucleotides

Bulged bases

6QZP|1|S2|U|198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|S2|C|193
6QZP|1|S2|C|194
6QZP|1|S2|C|195
6QZP|1|S2|C|196
6QZP|1|S2|U|197
6QZP|1|S2|U|198
6QZP|1|S2|C|199
6QZP|1|S2|G|200
6QZP|1|S2|C|201
6QZP|1|S2|G|202
6QZP|1|S2|G|203
6QZP|1|S2|G|204
6QZP|1|S2|G|205
6QZP|1|S2|G|206

Current chains

Chain S2

18S rRNA (1740-MER)

Nearby chains

Chain SI

40S ribosomal protein S8