HL_6R5Q_025

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCGCGCC

Length

8 nucleotides

Bulged bases

6R5Q|1|5|C|1481, 6R5Q|1|5|G|1482, 6R5Q|1|5|C|1485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|5|G|1479
6R5Q|1|5|C|1480
6R5Q|1|5|C|1481
6R5Q|1|5|G|1482
6R5Q|1|5|C|1483
6R5Q|1|5|G|1484
6R5Q|1|5|C|1485
6R5Q|1|5|C|1486

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain L

60S ribosomal protein L13

Chain i

60S ribosomal protein L36