HL_6R5Q_074
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 6R5Q|1|5|G|4694, 6R5Q|1|5|C|4698
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R5Q_074 not in the Motif Atlas
- Homologous match to HL_8C3A_068
- Geometric discrepancy: 0.0887
- The information below is about HL_8C3A_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.9
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
6R5Q|1|5|C|4688
6R5Q|1|5|U|4689
6R5Q|1|5|G|4690
6R5Q|1|5|A|4691
6R5Q|1|5|A|4692
6R5Q|1|5|C|4693
6R5Q|1|5|G|4694
6R5Q|1|5|C|4695
6R5Q|1|5|C|4696
6R5Q|1|5|U|4697
6R5Q|1|5|C|4698
6R5Q|1|5|U|4699
6R5Q|1|5|A|4700
6R5Q|1|5|A|4701
6R5Q|1|5|G|4702
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain H
- uL6
- Chain O
- uL13
- Chain m
- eL40
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