HL_6R5Q_121

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

6R5Q|1|5|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|5|G|1761
6R5Q|1|5|C|1762
6R5Q|1|5|C|1763
6R5Q|1|5|G|1764
6R5Q|1|5|A|1765
6R5Q|1|5|A|1766
6R5Q|1|5|A|1767
6R5Q|1|5|C|1768
6R5Q|1|5|G|1769
6R5Q|1|5|A|1770
6R5Q|1|5|U|1771
6R5Q|1|5|C|1772

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain II

uS13

Chain WW

uS17