HL_6R6G_036
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 6R6G|1|5|C|1631, 6R6G|1|5|A|1641, 6R6G|1|5|A|1642, 6R6G|1|5|U|1660, 6R6G|1|5|C|1662
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R6G|1|5|C|1624
6R6G|1|5|A|1625
6R6G|1|5|G|1626
6R6G|1|5|U|1627
6R6G|1|5|C|1628
6R6G|1|5|G|1629
6R6G|1|5|G|1630
6R6G|1|5|C|1631
6R6G|1|5|A|1632
6R6G|1|5|G|1633
6R6G|1|5|A|1634
6R6G|1|5|G|1635
6R6G|1|5|C|1636
6R6G|1|5|G|1637
6R6G|1|5|A|1638
6R6G|1|5|G|1639
6R6G|1|5|A|1640
6R6G|1|5|A|1641
6R6G|1|5|A|1642
6R6G|1|5|G|1643
6R6G|1|5|A|1644
6R6G|1|5|G|1645
6R6G|1|5|A|1646
6R6G|1|5|G|1647
6R6G|1|5|U|1648
6R6G|1|5|G|1649
6R6G|1|5|G|1650
6R6G|1|5|C|1651
6R6G|1|5|G|1652
6R6G|1|5|C|1653
6R6G|1|5|G|1654
6R6G|1|5|G|1655
6R6G|1|5|A|1656
6R6G|1|5|C|1657
6R6G|1|5|G|1658
6R6G|1|5|C|1659
6R6G|1|5|U|1660
6R6G|1|5|A|1661
6R6G|1|5|C|1662
6R6G|1|5|G|1663
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain Q
- eL18
- Chain b
- eL29
- Chain e
- eL32
- Chain r
- eL28
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