HL_6R6G_061

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUCAAACGGUAACGC

Length

15 nucleotides

Bulged bases

6R6G|1|5|A|2784, 6R6G|1|5|C|2791

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|G|2779
6R6G|1|5|U|2780
6R6G|1|5|C|2781
6R6G|1|5|A|2782
6R6G|1|5|A|2783
6R6G|1|5|A|2784
6R6G|1|5|C|2785
6R6G|1|5|G|2786
6R6G|1|5|G|2787
6R6G|1|5|U|2788
6R6G|1|5|A|2789
6R6G|1|5|A|2790
6R6G|1|5|C|2791
6R6G|1|5|G|2792
6R6G|1|5|C|2793

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein L10 (Predicted)

Chain T

eL21

Chain b

eL29