HL_6R6G_124

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGCCUUCCAGUCCGCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|G|995
6R6G|1|5|G|996
6R6G|1|5|C|997
6R6G|1|5|C|998
6R6G|1|5|U|999
6R6G|1|5|U|1000
6R6G|1|5|C|1001
6R6G|1|5|C|1002
6R6G|1|5|A|1003
6R6G|1|5|G|1004
6R6G|1|5|U|1005
6R6G|1|5|C|1006
6R6G|1|5|C|1007
6R6G|1|5|G|1008
6R6G|1|5|C|1009
6R6G|1|5|C|1010

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain F

uL30

Chain Q

eL18

Chain b

eL29