HL_6R6P_036
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCGGGGGCGGCGCGCGC
- Length
- 18 nucleotides
- Bulged bases
- 6R6P|1|5|C|2110, 6R6P|1|5|G|2111, 6R6P|1|5|G|2114, 6R6P|1|5|G|2117, 6R6P|1|5|G|2118, 6R6P|1|5|C|2123, 6R6P|1|5|G|2124
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R6P_036 not in the Motif Atlas
- Geometric match to HL_4O26_001
- Geometric discrepancy: 0.3678
- The information below is about HL_4O26_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53014.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6R6P|1|5|G|2108
6R6P|1|5|G|2109
6R6P|1|5|C|2110
6R6P|1|5|G|2111
6R6P|1|5|G|2112
6R6P|1|5|G|2113
6R6P|1|5|G|2114
6R6P|1|5|G|2115
6R6P|1|5|C|2116
6R6P|1|5|G|2117
6R6P|1|5|G|2118
6R6P|1|5|C|2119
6R6P|1|5|G|2120
6R6P|1|5|C|2121
6R6P|1|5|G|2122
6R6P|1|5|C|2123
6R6P|1|5|G|2124
6R6P|1|5|C|2125
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
Coloring options: