HL_6R6P_043
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 6R6P|1|5|U|2530, 6R6P|1|5|C|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R6P_043 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.086
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6R6P|1|5|G|2523
6R6P|1|5|U|2524
6R6P|1|5|U|2525
6R6P|1|5|C|2526
6R6P|1|5|A|2527
6R6P|1|5|G|2528
6R6P|1|5|A|2529
6R6P|1|5|U|2530
6R6P|1|5|C|2531
6R6P|1|5|C|2532
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain R
- eL19
- Chain X
- uL23
- Chain g
- eL34
- Chain l
- ribosomal protein eL39
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