HL_6R7Q_090

3D structure

PDB id

6R7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with Sec61.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R7Q|1|K|G|377
6R7Q|1|K|U|378
6R7Q|1|K|C|379
6R7Q|1|K|G|380
6R7Q|1|K|C|381
6R7Q|1|K|C|382
6R7Q|1|K|G|383
6R7Q|1|K|U|384
6R7Q|1|K|G|385
6R7Q|1|K|C|386
6R7Q|1|K|C|387

Current chains

Chain K

18S ribosomal RNA

Nearby chains

Chain CC

40S ribosomal protein S8

Chain EE

Ribosomal protein S11