HL_6R86_044

3D structure

PDB id

6R86 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast Vms1-60S ribosomal subunit complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCAGACGCAGCGUUGUAGACGGC

Length

24 nucleotides

Bulged bases

6R86|1|1|C|2050

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R86|1|1|G|1969
6R86|1|1|U|1970
6R86|1|1|C|1971
6R86|1|1|A|1972
6R86|1|1|G|1973
6R86|1|1|A|1974
6R86|1|1|C|1975
6R86|1|1|G|1976
6R86|1|1|C|1977
6R86|1|1|A|1978
6R86|1|1|G|1979
6R86|1|1|C|1980
6R86|1|1|G|2042
6R86|1|1|U|2043
6R86|1|1|U|2044
6R86|1|1|G|2045
6R86|1|1|U|2046
6R86|1|1|A|2047
6R86|1|1|G|2048
6R86|1|1|A|2049
6R86|1|1|C|2050
6R86|1|1|G|2051
6R86|1|1|G|2052
6R86|1|1|C|2053

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain m

60S ribosomal protein L38