HL_6RM3_008
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGAAUGAAAU
- Length
- 10 nucleotides
- Bulged bases
- 6RM3|1|L50|G|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6RM3_008 not in the Motif Atlas
- Homologous match to HL_5TBW_009
- Geometric discrepancy: 0.3764
- The information below is about HL_5TBW_009
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_15076.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6RM3|1|L50|A|330
6RM3|1|L50|G|331
6RM3|1|L50|A|332
6RM3|1|L50|A|333
6RM3|1|L50|U|334
6RM3|1|L50|G|335
6RM3|1|L50|A|336
6RM3|1|L50|A|337
6RM3|1|L50|A|338
6RM3|1|L50|U|339
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain LAA
- uL15
- Chain LII
- eL36
- Chain LN0
- eL15
- Chain LOO
- eL42
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