HL_6RM3_026

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUAAUAAUU

Length

10 nucleotides

Bulged bases

6RM3|1|L50|A|1219, 6RM3|1|L50|U|1220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_026 not in the Motif Atlas

Homologous match to HL_8C3A_035

Geometric discrepancy: 0.1715

The information below is about HL_8C3A_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35087.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6RM3|1|L50|A|1212
6RM3|1|L50|U|1213
6RM3|1|L50|U|1214
6RM3|1|L50|A|1215
6RM3|1|L50|A|1216
6RM3|1|L50|U|1217
6RM3|1|L50|A|1218
6RM3|1|L50|A|1219
6RM3|1|L50|U|1220
6RM3|1|L50|U|1221

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LGG

eL34

Chain LR0

eL19

Chain LX0

uL23