HL_6RM3_027

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_027 not in the Motif Atlas

Geometric match to HL_5TBW_036

Geometric discrepancy: 0.1687

The information below is about HL_5TBW_036

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6RM3|1|L50|G|1241
6RM3|1|L50|G|1242
6RM3|1|L50|U|1243
6RM3|1|L50|A|1244
6RM3|1|L50|A|1245
6RM3|1|L50|C|1246

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LGG

eL34

Chain LZ0

eL27