HL_6RM3_030

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAUA

Length

5 nucleotides

Bulged bases

6RM3|1|L50|G|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_030 not in the Motif Atlas

Geometric match to HL_4V9F_041

Geometric discrepancy: 0.3183

The information below is about HL_4V9F_041

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6RM3|1|L50|U|1346
6RM3|1|L50|G|1347
6RM3|1|L50|A|1348
6RM3|1|L50|U|1349
6RM3|1|L50|A|1350

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LA0

uL2

Chain LPP

eL43