HL_6RM3_033

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUUGG

Length

6 nucleotides

Bulged bases

6RM3|1|L50|U|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_033 not in the Motif Atlas

Geometric match to HL_4LFB_009

Geometric discrepancy: 0.1009

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

6RM3|1|L50|C|1458
6RM3|1|L50|U|1459
6RM3|1|L50|U|1460
6RM3|1|L50|U|1461
6RM3|1|L50|G|1462
6RM3|1|L50|G|1463

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LPP

eL43

Chain S60

Small subunit ribosomal RNA; SSU rRNA