HL_6RM3_056

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAUACUAC

Length

9 nucleotides

Bulged bases

6RM3|1|L50|A|2419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_056 not in the Motif Atlas

Geometric match to HL_4V9F_069

Geometric discrepancy: 0.175

The information below is about HL_4V9F_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

12

Unit IDs

6RM3|1|L50|G|2418
6RM3|1|L50|A|2419
6RM3|1|L50|A|2420
6RM3|1|L50|U|2421
6RM3|1|L50|A|2422
6RM3|1|L50|C|2423
6RM3|1|L50|U|2424
6RM3|1|L50|A|2425
6RM3|1|L50|C|2426

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31

Chain LP0

uL22