HL_6RW5_001

3D structure

PDB id

6RW5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

UUUGGUCCUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RW5_001 not in the Motif Atlas

Homologous match to HL_4LFB_001

Geometric discrepancy: 0.1332

The information below is about HL_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73535.1

Basepair signature

cWW-tHW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

6RW5|1|A|U|654
6RW5|1|A|U|655
6RW5|1|A|U|656
6RW5|1|A|G|657
6RW5|1|A|G|658
6RW5|1|A|U|659
6RW5|1|A|C|660
6RW5|1|A|C|661
6RW5|1|A|U|662
6RW5|1|A|A|663
6RW5|1|A|G|664

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain D

28S ribosomal protein S5, mitochondrial