HL_6RXU_028

3D structure

PDB id

6RXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAUUUUUG

Length

9 nucleotides

Bulged bases

6RXU|1|C1|U|1643

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RXU|1|C1|U|1640
6RXU|1|C1|U|1641
6RXU|1|C1|A|1642
6RXU|1|C1|U|1643
6RXU|1|C1|U|1644
6RXU|1|C1|U|1645
6RXU|1|C1|U|1646
6RXU|1|C1|U|1647
6RXU|1|C1|G|1648

Current chains

Chain C1

35S rRNA

Nearby chains

Chain Ca

40S ribosomal protein S1