HL_6RXU_031

3D structure

PDB id

6RXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAUAGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RXU|1|C1|C|2236
6RXU|1|C1|G|2237
6RXU|1|C1|A|2238
6RXU|1|C1|U|2239
6RXU|1|C1|A|2327
6RXU|1|C1|G|2328
6RXU|1|C1|A|2329
6RXU|1|C1|G|2330

Current chains

Chain C1

35S rRNA

Nearby chains

Chain CL

Putative U3 small nucleolar ribonucleoprotein protein

Chain UB

Utp2

Chain UL

Utp12

Chain UM

Utp13