HL_6RZZ_078

3D structure

PDB id

6RZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCGUUCAUAGC

Length

11 nucleotides

Bulged bases

6RZZ|1|A|U|2842, 6RZZ|1|A|U|2843, 6RZZ|1|A|A|2845, 6RZZ|1|A|U|2846

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RZZ|1|A|G|2839
6RZZ|1|A|C|2840
6RZZ|1|A|G|2841
6RZZ|1|A|U|2842
6RZZ|1|A|U|2843
6RZZ|1|A|C|2844
6RZZ|1|A|A|2845
6RZZ|1|A|U|2846
6RZZ|1|A|A|2847
6RZZ|1|A|G|2848
6RZZ|1|A|C|2849

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain s

Tyrosine-protein phosphatase YVH1