HL_6S0K_006
3D structure
- PDB id
- 6S0K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome nascent chain in complex with SecA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 6S0K|1|A|A|196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S0K_006 not in the Motif Atlas
- Geometric match to HL_5J7L_139
- Geometric discrepancy: 0.0994
- The information below is about HL_5J7L_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_30068.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6S0K|1|A|G|194
6S0K|1|A|A|195
6S0K|1|A|A|196
6S0K|1|A|A|197
6S0K|1|A|C|198
6S0K|1|A|A|199
6S0K|1|A|U|200
6S0K|1|A|C|201
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L15
- Chain Y
- 50S ribosomal protein L28
Coloring options: