HL_6S0Z_030

3D structure

PDB id

6S0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UCCUUUGGA

Length

9 nucleotides

Bulged bases

6S0Z|1|A|G|1219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6S0Z_030 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3407

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27483.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

6S0Z|1|A|U|1212
6S0Z|1|A|C|1213
6S0Z|1|A|C|1214
6S0Z|1|A|U|1215
6S0Z|1|A|U|1216
6S0Z|1|A|U|1217
6S0Z|1|A|G|1218
6S0Z|1|A|G|1219
6S0Z|1|A|A|1220

Current chains

Chain A

23S ribosomal RNA

Nearby chains