HL_6S0Z_045

3D structure

PDB id

6S0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UUAGCUUCUGCGAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6S0Z_045 not in the Motif Atlas

Homologous match to HL_4WF9_045

Geometric discrepancy: 0.402

The information below is about HL_4WF9_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0Z|1|A|U|1891
6S0Z|1|A|U|1892
6S0Z|1|A|A|1893
6S0Z|1|A|G|1894
6S0Z|1|A|C|1895
6S0Z|1|A|U|1896
6S0Z|1|A|U|1897
6S0Z|1|A|C|1898
6S0Z|1|A|U|1899
6S0Z|1|A|G|1900
6S0Z|1|A|C|1901
6S0Z|1|A|G|1902
6S0Z|1|A|A|1903
6S0Z|1|A|A|1904
6S0Z|1|A|G|1905

Current chains

Chain A

23S ribosomal RNA

Nearby chains