HL_6S0Z_054
3D structure
- PDB id
- 6S0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GUGUAAAGGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S0Z_054 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2529
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6S0Z|1|A|G|2350
6S0Z|1|A|U|2351
6S0Z|1|A|G|2352
6S0Z|1|A|U|2353
6S0Z|1|A|A|2354
6S0Z|1|A|A|2355
6S0Z|1|A|A|2356
6S0Z|1|A|G|2357
6S0Z|1|A|G|2358
6S0Z|1|A|C|2359
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain K
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L27
Coloring options: