HL_6S0Z_063

3D structure

PDB id

6S0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UGCCAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6S0Z_063 not in the Motif Atlas

Homologous match to HL_4WF9_061

Geometric discrepancy: 0.1549

The information below is about HL_4WF9_061

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_12125.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6S0Z|1|A|U|2728
6S0Z|1|A|G|2729
6S0Z|1|A|C|2730
6S0Z|1|A|C|2731
6S0Z|1|A|A|2732
6S0Z|1|A|A|2733

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L17