HL_6S0Z_071

3D structure

PDB id

6S0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GCGAUUGGAUUGC

Length

13 nucleotides

Bulged bases

6S0Z|1|A|G|1496, 6S0Z|1|A|A|1497, 6S0Z|1|A|U|1498, 6S0Z|1|A|U|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0Z|1|A|G|1494
6S0Z|1|A|C|1495
6S0Z|1|A|G|1496
6S0Z|1|A|A|1497
6S0Z|1|A|U|1498
6S0Z|1|A|U|1499
6S0Z|1|A|G|1500
6S0Z|1|A|G|1501
6S0Z|1|A|A|1502
6S0Z|1|A|U|1503
6S0Z|1|A|U|1504
6S0Z|1|A|G|1505
6S0Z|1|A|C|1506

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L17