HL_6SG9_002

3D structure

PDB id

6SG9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Head domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAUAAAUUGAAA

Length

13 nucleotides

Bulged bases

6SG9|1|CA|U|460, 6SG9|1|CA|A|462

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SG9|1|CA|U|457
6SG9|1|CA|U|458
6SG9|1|CA|A|459
6SG9|1|CA|U|460
6SG9|1|CA|A|461
6SG9|1|CA|A|462
6SG9|1|CA|A|463
6SG9|1|CA|U|464
6SG9|1|CA|U|465
6SG9|1|CA|G|466
6SG9|1|CA|A|467
6SG9|1|CA|A|468
6SG9|1|CA|A|469

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CI

uS9m

Chain CK

uS11m

Chain DG

mS54

Chain DH

mS55 (KRIPP8)

Chain Fa

mt-SAF30