HL_6SGA_001

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUAAUAAUU

Length

9 nucleotides

Bulged bases

6SGA|1|CA|A|111, 6SGA|1|CA|U|116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|A|109
6SGA|1|CA|U|110
6SGA|1|CA|A|111
6SGA|1|CA|A|112
6SGA|1|CA|U|113
6SGA|1|CA|A|114
6SGA|1|CA|A|115
6SGA|1|CA|U|116
6SGA|1|CA|U|117

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CO

uS15m

Chain CQ

uS17m

Chain DR

mS65

Chain DU

mS68

Chain F3

mt-SAF3