HL_6SGA_002

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAAUG

Length

6 nucleotides

Bulged bases

6SGA|1|CA|U|146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|U|142
6SGA|1|CA|U|143
6SGA|1|CA|A|144
6SGA|1|CA|A|145
6SGA|1|CA|U|146
6SGA|1|CA|G|147

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CE

uS5m

Chain CH

uS8m

Chain CQ

uS17m

Chain DD

mS51 (KRIPP1)

Chain F7

mt-SAF7 (KRIPP10)