HL_6SGA_003

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGCCGUUGCG

Length

11 nucleotides

Bulged bases

6SGA|1|CA|G|239, 6SGA|1|CA|U|240, 6SGA|1|CA|U|241, 6SGA|1|CA|G|242

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|C|234
6SGA|1|CA|A|235
6SGA|1|CA|G|236
6SGA|1|CA|C|237
6SGA|1|CA|C|238
6SGA|1|CA|G|239
6SGA|1|CA|U|240
6SGA|1|CA|U|241
6SGA|1|CA|G|242
6SGA|1|CA|C|243
6SGA|1|CA|G|244

Current chains

Chain CA

9S rRNA

Nearby chains

Chain FB

mt-SAF11

Chain FJ

mt-SAF18

Chain FT

mt-SAF24

Chain FU

mt-SAF24