HL_6SGA_004
3D structure
- PDB id
- 6SGA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Body domain of the mt-SSU assemblosome from Trypanosoma brucei
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUAAGUGCUGAUUUAACC
- Length
- 19 nucleotides
- Bulged bases
- 6SGA|1|CA|G|297, 6SGA|1|CA|C|298, 6SGA|1|CA|U|304, 6SGA|1|CA|A|305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SGA|1|CA|G|290
6SGA|1|CA|U|291
6SGA|1|CA|U|292
6SGA|1|CA|A|293
6SGA|1|CA|A|294
6SGA|1|CA|G|295
6SGA|1|CA|U|296
6SGA|1|CA|G|297
6SGA|1|CA|C|298
6SGA|1|CA|U|299
6SGA|1|CA|G|300
6SGA|1|CA|A|301
6SGA|1|CA|U|302
6SGA|1|CA|U|303
6SGA|1|CA|U|304
6SGA|1|CA|A|305
6SGA|1|CA|A|306
6SGA|1|CA|C|307
6SGA|1|CA|C|308
Current chains
- Chain CA
- 9S rRNA
Nearby chains
- Chain CF
- bS6m
- Chain CK
- uS11m
- Chain CO
- uS15m
- Chain CR
- bS18m
- Chain F7
- mt-SAF7 (KRIPP10)
- Chain FJ
- mt-SAF18
- Chain FY
- mt-SAF28
- Chain Fa
- mt-SAF30
- Chain Fd
- mt-SAF33
Coloring options: