HL_6SGA_006

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAUAGAAA

Length

9 nucleotides

Bulged bases

6SGA|1|CA|U|383

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|U|380
6SGA|1|CA|U|381
6SGA|1|CA|A|382
6SGA|1|CA|U|383
6SGA|1|CA|A|530
6SGA|1|CA|G|531
6SGA|1|CA|A|532
6SGA|1|CA|A|533
6SGA|1|CA|A|534

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CE

uS5m

Chain Cn

mS38

Chain DL

mS59

Chain FJ

mt-SAF18