HL_6SGA_007

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUAAUAA

Length

8 nucleotides

Bulged bases

6SGA|1|CA|U|566, 6SGA|1|CA|A|567, 6SGA|1|CA|A|568

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|U|564
6SGA|1|CA|A|565
6SGA|1|CA|U|566
6SGA|1|CA|A|567
6SGA|1|CA|A|568
6SGA|1|CA|U|569
6SGA|1|CA|A|570
6SGA|1|CA|A|571

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CQ

uS17m

Chain F3

mt-SAF3

Chain FB

mt-SAF11

Chain FO

mt-SAF22 (KRIPP17)

Chain FQ

mt-SAF24

Chain FR

mt-SAF24

Chain UF

UNK-F