HL_6SGB_001

3D structure

PDB id

6SGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

mt-SSU assemblosome of Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUAAUAAUU

Length

9 nucleotides

Bulged bases

6SGB|1|CA|A|111, 6SGB|1|CA|U|116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGB|1|CA|A|109
6SGB|1|CA|U|110
6SGB|1|CA|A|111
6SGB|1|CA|A|112
6SGB|1|CA|U|113
6SGB|1|CA|A|114
6SGB|1|CA|A|115
6SGB|1|CA|U|116
6SGB|1|CA|U|117

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CO

uS15m

Chain CQ

uS17m

Chain DR

mS65

Chain DU

mS68

Chain F3

mt-SAF3