HL_6SGB_003

3D structure

PDB id

6SGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

mt-SSU assemblosome of Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAGCCGUUGCG

Length

11 nucleotides

Bulged bases

6SGB|1|CA|G|239, 6SGB|1|CA|U|240, 6SGB|1|CA|U|241

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGB|1|CA|C|234
6SGB|1|CA|A|235
6SGB|1|CA|G|236
6SGB|1|CA|C|237
6SGB|1|CA|C|238
6SGB|1|CA|G|239
6SGB|1|CA|U|240
6SGB|1|CA|U|241
6SGB|1|CA|G|242
6SGB|1|CA|C|243
6SGB|1|CA|G|244

Current chains

Chain CA

9S rRNA

Nearby chains

Chain F1

mt-SAF1 (RSM22)

Chain FB

mt-SAF11

Chain FJ

mt-SAF18

Chain FT

mt-SAF24

Chain FU

mt-SAF24