HL_6SGB_006

3D structure

PDB id

6SGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

mt-SSU assemblosome of Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAUAAAUUGAAA

Length

13 nucleotides

Bulged bases

6SGB|1|CA|U|460, 6SGB|1|CA|A|462

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGB|1|CA|U|457
6SGB|1|CA|U|458
6SGB|1|CA|A|459
6SGB|1|CA|U|460
6SGB|1|CA|A|461
6SGB|1|CA|A|462
6SGB|1|CA|A|463
6SGB|1|CA|U|464
6SGB|1|CA|U|465
6SGB|1|CA|G|466
6SGB|1|CA|A|467
6SGB|1|CA|A|468
6SGB|1|CA|A|469

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CI

uS9m

Chain CK

uS11m

Chain DG

mS54

Chain DH

mS55 (KRIPP8)

Chain DL

mS59

Chain FJ

mt-SAF18

Chain Fa

mt-SAF30