HL_6SKG_016

3D structure

PDB id

6SKG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

6SKG|1|Aa|U|739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKG|1|Aa|G|732
6SKG|1|Aa|A|733
6SKG|1|Aa|U|734
6SKG|1|Aa|U|735
6SKG|1|Aa|A|736
6SKG|1|Aa|G|737
6SKG|1|Aa|A|738
6SKG|1|Aa|U|739
6SKG|1|Aa|A|740
6SKG|1|Aa|C|741
6SKG|1|Aa|C|742

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain An

30S ribosomal protein S11

Chain BA

Large subunit ribosomal RNA; LSU rRNA