HL_6SPB_035

3D structure

PDB id

6SPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GCGUUGGUUGUC

Length

12 nucleotides

Bulged bases

6SPB|1|A|U|1440, 6SPB|1|A|U|1441, 6SPB|1|A|U|1447

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPB|1|A|G|1437
6SPB|1|A|C|1438
6SPB|1|A|G|1439
6SPB|1|A|U|1440
6SPB|1|A|U|1441
6SPB|1|A|G|1442
6SPB|1|A|G|1443
6SPB|1|A|U|1444
6SPB|1|A|U|1445
6SPB|1|A|G|1446
6SPB|1|A|U|1447
6SPB|1|A|C|1448

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17