HL_6SPB_047

3D structure

PDB id

6SPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CGUAACUAUAACG

Length

13 nucleotides

Bulged bases

6SPB|1|A|A|1900

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPB|1|A|C|1896
6SPB|1|A|G|1897
6SPB|1|A|U|1898
6SPB|1|A|A|1899
6SPB|1|A|A|1900
6SPB|1|A|C|1901
6SPB|1|A|U|1902
6SPB|1|A|A|1903
6SPB|1|A|U|1904
6SPB|1|A|A|1905
6SPB|1|A|A|1906
6SPB|1|A|C|1907
6SPB|1|A|G|1908

Current chains

Chain A

23S ribosomal RNA

Nearby chains