HL_6SPB_071

3D structure

PDB id

6SPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGGGUCAUCCCGACUUAC

Length

18 nucleotides

Bulged bases

6SPB|1|A|A|881, 6SPB|1|A|A|885

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPB|1|A|G|869
6SPB|1|A|G|870
6SPB|1|A|G|871
6SPB|1|A|G|872
6SPB|1|A|U|873
6SPB|1|A|C|874
6SPB|1|A|A|875
6SPB|1|A|U|876
6SPB|1|A|C|877
6SPB|1|A|C|878
6SPB|1|A|C|879
6SPB|1|A|G|880
6SPB|1|A|A|881
6SPB|1|A|C|882
6SPB|1|A|U|883
6SPB|1|A|U|884
6SPB|1|A|A|885
6SPB|1|A|C|886

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L25